Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.15□□□□□ -0.14
SCN1BQ07699 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SCN1BQ07699 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.15
SCN1BQ07699 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
SCN1BQ07699 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 AC105250.1-201ENST00000509378 2057 ntBASIC14.14□□□□□ -0.15
SCN1BQ07699 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 C18orf15-201ENST00000623680 2534 ntBASIC14.14□□□□□ -0.15
SCN1BQ07699 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 AC008677.1-201ENST00000519230 1561 ntBASIC14.14□□□□□ -0.15
SCN1BQ07699 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SCN1BQ07699 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SCN1BQ07699 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SCN1BQ07699 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN1BQ07699 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.14□□□□□ -0.15
SCN1BQ07699 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN1BQ07699 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SCN1BQ07699 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.14□□□□□ -0.15
SCN1BQ07699 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 FAM197Y8-203ENST00000450145 560 ntBASIC14.14□□□□□ -0.15
SCN1BQ07699 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.14□□□□□ -0.15
SCN1BQ07699 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.14□□□□□ -0.15
SCN1BQ07699 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.14□□□□□ -0.15
SCN1BQ07699 MPDU1-223ENST00000582151 728 ntBASIC14.14□□□□□ -0.15
SCN1BQ07699 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.14□□□□□ -0.15
SCN1BQ07699 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SCN1BQ07699 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SCN1BQ07699 AL805961.1-202ENST00000641562 540 ntBASIC14.14□□□□□ -0.15
SCN1BQ07699 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SCN1BQ07699 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
SCN1BQ07699 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SCN1BQ07699 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SCN1BQ07699 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SCN1BQ07699 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
SCN1BQ07699 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.14□□□□□ -0.15
SCN1BQ07699 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.14□□□□□ -0.15
SCN1BQ07699 AJ011931.1-201ENST00000618749 2492 ntBASIC14.14□□□□□ -0.15
SCN1BQ07699 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SCN1BQ07699 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SCN1BQ07699 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SCN1BQ07699 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.13□□□□□ -0.15
SCN1BQ07699 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SCN1BQ07699 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 AC131009.4-201ENST00000624048 1740 ntBASIC14.13□□□□□ -0.15
SCN1BQ07699 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SCN1BQ07699 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SCN1BQ07699 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
SCN1BQ07699 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 SLC25A6P2-201ENST00000497974 877 ntBASIC14.13□□□□□ -0.15
SCN1BQ07699 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.13□□□□□ -0.15
SCN1BQ07699 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.13□□□□□ -0.15
SCN1BQ07699 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.13□□□□□ -0.15
SCN1BQ07699 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SCN1BQ07699 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
SCN1BQ07699 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.13□□□□□ -0.15
SCN1BQ07699 GGTLC5P-201ENST00000617623 998 ntBASIC14.13□□□□□ -0.15
SCN1BQ07699 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms