Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 YBX1P6-201ENST00000442962 1002 ntBASIC14.01□□□□□ -0.17
CACNA1DQ01668 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AL139011.1-202ENST00000642063 584 ntBASIC14.01□□□□□ -0.17
CACNA1DQ01668 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 AC138028.6-201ENST00000616106 1482 ntBASIC14.01□□□□□ -0.17
CACNA1DQ01668 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CACNA1DQ01668 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.01□□□□□ -0.17
CACNA1DQ01668 GOLGA2P9-201ENST00000596977 1937 ntBASIC14□□□□□ -0.17
CACNA1DQ01668 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14□□□□□ -0.17
CACNA1DQ01668 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14□□□□□ -0.17
CACNA1DQ01668 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14□□□□□ -0.17
CACNA1DQ01668 ADM-202ENST00000524948 584 ntTSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 AC114501.1-201ENST00000445949 172 ntBASIC14□□□□□ -0.17
CACNA1DQ01668 RN7SL399P-201ENST00000471648 279 ntBASIC14□□□□□ -0.17
CACNA1DQ01668 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14□□□□□ -0.17
CACNA1DQ01668 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 MAX-210ENST00000555419 765 ntTSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14□□□□□ -0.17
CACNA1DQ01668 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CACNA1DQ01668 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
CACNA1DQ01668 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 AL391256.1-201ENST00000443260 1855 ntBASIC14□□□□□ -0.17
CACNA1DQ01668 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CACNA1DQ01668 AL512652.2-201ENST00000625156 1716 ntBASIC14□□□□□ -0.17
CACNA1DQ01668 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14□□□□□ -0.17
CACNA1DQ01668 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CACNA1DQ01668 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.99□□□□□ -0.17
CACNA1DQ01668 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CACNA1DQ01668 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CACNA1DQ01668 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CACNA1DQ01668 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.99□□□□□ -0.17
CACNA1DQ01668 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CACNA1DQ01668 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms