Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 MARK2P5-201ENST00000507649 634 ntBASIC19.17■□□□□ 0.66
SCN7AQ01118 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN7AQ01118 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.17■□□□□ 0.66
SCN7AQ01118 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN7AQ01118 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.17■□□□□ 0.66
SCN7AQ01118 AC009955.4-201ENST00000597192 544 ntBASIC19.17■□□□□ 0.66
SCN7AQ01118 AL358472.3-201ENST00000608147 415 ntBASIC19.17■□□□□ 0.66
SCN7AQ01118 AC128714.1-201ENST00000637035 887 ntBASIC19.17■□□□□ 0.66
SCN7AQ01118 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN7AQ01118 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN7AQ01118 AC127383.1-201ENST00000444697 1800 ntBASIC19.17■□□□□ 0.66
SCN7AQ01118 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SCN7AQ01118 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SCN7AQ01118 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN7AQ01118 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.17■□□□□ 0.66
SCN7AQ01118 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.17■□□□□ 0.66
SCN7AQ01118 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 MIR4706-201ENST00000582134 82 ntBASIC19.17■□□□□ 0.66
SCN7AQ01118 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SCN7AQ01118 AC009090.5-201ENST00000624886 2285 ntBASIC19.16■□□□□ 0.66
SCN7AQ01118 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SCN7AQ01118 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN7AQ01118 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN7AQ01118 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SCN7AQ01118 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN7AQ01118 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SCN7AQ01118 AC022616.1-201ENST00000518688 554 ntBASIC19.16■□□□□ 0.66
SCN7AQ01118 AC024681.1-201ENST00000521917 487 ntBASIC19.16■□□□□ 0.66
SCN7AQ01118 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN7AQ01118 MIR4683-201ENST00000579659 81 ntBASIC19.16■□□□□ 0.66
SCN7AQ01118 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.16■□□□□ 0.66
SCN7AQ01118 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.16■□□□□ 0.66
SCN7AQ01118 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN7AQ01118 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SCN7AQ01118 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 AP000593.2-201ENST00000542775 1433 ntBASIC19.16■□□□□ 0.66
SCN7AQ01118 REXO1L4P-201ENST00000605109 1937 ntBASIC19.16■□□□□ 0.66
SCN7AQ01118 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.16■□□□□ 0.66
SCN7AQ01118 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.16■□□□□ 0.66
SCN7AQ01118 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SCN7AQ01118 AC024909.3-201ENST00000611513 2257 ntBASIC19.15■□□□□ 0.66
SCN7AQ01118 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SCN7AQ01118 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN7AQ01118 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCN7AQ01118 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN7AQ01118 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SCN7AQ01118 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SCN7AQ01118 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.15■□□□□ 0.66
SCN7AQ01118 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 AL596276.2-201ENST00000447525 331 ntBASIC19.15■□□□□ 0.66
SCN7AQ01118 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN7AQ01118 RN7SL769P-201ENST00000469386 295 ntBASIC19.15■□□□□ 0.66
SCN7AQ01118 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN7AQ01118 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.15■□□□□ 0.66
SCN7AQ01118 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN7AQ01118 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.15■□□□□ 0.66
SCN7AQ01118 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 NAT9-224ENST00000583757 583 ntTSL 3 BASIC19.15■□□□□ 0.66
SCN7AQ01118 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 AC079336.7-201ENST00000623428 1078 ntBASIC19.15■□□□□ 0.66
SCN7AQ01118 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.15■□□□□ 0.66
SCN7AQ01118 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN7AQ01118 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN7AQ01118 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.15■□□□□ 0.66
SCN7AQ01118 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SCN7AQ01118 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms