Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 AL513523.2-202ENST00000427283 2040 ntBASIC17.07■□□□□ 0.32
CDC42EP1Q00587 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDC42EP1Q00587 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 AL645937.2-201ENST00000396808 931 ntBASIC17.06■□□□□ 0.32
CDC42EP1Q00587 RPL5P21-201ENST00000404620 815 ntBASIC17.06■□□□□ 0.32
CDC42EP1Q00587 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 AC114812.1-204ENST00000449669 728 ntBASIC17.06■□□□□ 0.32
CDC42EP1Q00587 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 AP000812.2-201ENST00000538934 718 ntBASIC17.06■□□□□ 0.32
CDC42EP1Q00587 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 AC025181.2-201ENST00000606994 802 ntBASIC17.06■□□□□ 0.32
CDC42EP1Q00587 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CDC42EP1Q00587 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AC024909.3-201ENST00000611513 2257 ntBASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 RPL7P3-201ENST00000441388 714 ntBASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 CROCCP4-201ENST00000457096 498 ntBASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AC007551.1-201ENST00000457394 519 ntBASIC17.05■□□□□ 0.32
CDC42EP1Q00587 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AP001582.1-201ENST00000525856 295 ntBASIC17.05■□□□□ 0.32
CDC42EP1Q00587 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDC42EP1Q00587 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms