Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX1P83916 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX1P83916 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 AC005622.1-201ENST00000636801 1703 ntBASIC16.51■□□□□ 0.23
CBX1P83916 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CBX1P83916 AL353732.1-201ENST00000569618 1459 ntBASIC16.51■□□□□ 0.23
CBX1P83916 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC16.51■□□□□ 0.23
CBX1P83916 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.51■□□□□ 0.23
CBX1P83916 AC068472.1-201ENST00000474589 881 ntBASIC16.51■□□□□ 0.23
CBX1P83916 C1QBPP2-201ENST00000528754 825 ntBASIC16.51■□□□□ 0.23
CBX1P83916 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.51■□□□□ 0.23
CBX1P83916 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CBX1P83916 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
CBX1P83916 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX1P83916 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CBX1P83916 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX1P83916 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.51■□□□□ 0.23
CBX1P83916 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CBX1P83916 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX1P83916 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CBX1P83916 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX1P83916 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.5■□□□□ 0.23
CBX1P83916 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 CRYGFP-201ENST00000418459 633 ntBASIC16.5■□□□□ 0.23
CBX1P83916 HLA-L-209ENST00000420110 1011 ntBASIC16.5■□□□□ 0.23
CBX1P83916 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.5■□□□□ 0.23
CBX1P83916 AC116562.2-201ENST00000507042 360 ntBASIC16.5■□□□□ 0.23
CBX1P83916 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.5■□□□□ 0.23
CBX1P83916 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX1P83916 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.5■□□□□ 0.23
CBX1P83916 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.5■□□□□ 0.23
CBX1P83916 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX1P83916 AL157888.1-201ENST00000631930 593 ntBASIC16.5■□□□□ 0.23
CBX1P83916 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX1P83916 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CBX1P83916 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CBX1P83916 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX1P83916 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX1P83916 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX1P83916 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CBX1P83916 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX1P83916 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX1P83916 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC16.49■□□□□ 0.23
CBX1P83916 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CBX1P83916 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX1P83916 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms