Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RPS4XP62701 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.25□□□□□ -0.13
RPS4XP62701 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RPS4XP62701 NFIC-211ENST00000641145 8399 ntBASIC14.25□□□□□ -0.13
RPS4XP62701 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 AC236430.1-201ENST00000402231 743 ntBASIC14.24□□□□□ -0.13
RPS4XP62701 SPDYE17-201ENST00000412399 783 ntBASIC14.24□□□□□ -0.13
RPS4XP62701 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.24□□□□□ -0.13
RPS4XP62701 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.24□□□□□ -0.13
RPS4XP62701 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.24□□□□□ -0.13
RPS4XP62701 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 AC126365.1-201ENST00000578585 1514 ntBASIC14.24□□□□□ -0.13
RPS4XP62701 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.24□□□□□ -0.13
RPS4XP62701 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RPS4XP62701 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.24□□□□□ -0.13
RPS4XP62701 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS4XP62701 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS4XP62701 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS4XP62701 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RPS4XP62701 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS4XP62701 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS4XP62701 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
RPS4XP62701 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.23□□□□□ -0.13
RPS4XP62701 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS4XP62701 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.23□□□□□ -0.13
RPS4XP62701 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS4XP62701 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.23□□□□□ -0.13
RPS4XP62701 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.23□□□□□ -0.13
RPS4XP62701 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.23□□□□□ -0.13
RPS4XP62701 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.23□□□□□ -0.13
RPS4XP62701 AC007967.4-201ENST00000614700 386 ntBASIC14.23□□□□□ -0.13
RPS4XP62701 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.23□□□□□ -0.13
RPS4XP62701 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RPS4XP62701 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.23□□□□□ -0.13
RPS4XP62701 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RPS4XP62701 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms