Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
SMIM11AP58511 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM11AP58511 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM11AP58511 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SMIM11AP58511 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.58□□□□□ -0.07
SMIM11AP58511 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 AC013726.1-201ENST00000563747 2285 ntBASIC14.58□□□□□ -0.08
SMIM11AP58511 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11AP58511 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
SMIM11AP58511 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
SMIM11AP58511 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
SMIM11AP58511 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.58□□□□□ -0.08
SMIM11AP58511 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.58□□□□□ -0.08
SMIM11AP58511 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11AP58511 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.58□□□□□ -0.08
SMIM11AP58511 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11AP58511 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11AP58511 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.58□□□□□ -0.08
SMIM11AP58511 AC026979.3-201ENST00000607315 403 ntBASIC14.58□□□□□ -0.08
SMIM11AP58511 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.58□□□□□ -0.08
SMIM11AP58511 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SMIM11AP58511 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
SMIM11AP58511 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11AP58511 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SMIM11AP58511 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM11AP58511 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SMIM11AP58511 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.58□□□□□ -0.08
SMIM11AP58511 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.58□□□□□ -0.08
SMIM11AP58511 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.57□□□□□ -0.08
SMIM11AP58511 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM11AP58511 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 AL139010.1-201ENST00000454878 894 ntBASIC14.57□□□□□ -0.08
SMIM11AP58511 RNA5SP410-201ENST00000516285 106 ntBASIC14.57□□□□□ -0.08
SMIM11AP58511 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.57□□□□□ -0.08
SMIM11AP58511 AL138918.1-201ENST00000568306 659 ntBASIC14.57□□□□□ -0.08
SMIM11AP58511 AP002472.1-201ENST00000577490 586 ntBASIC14.57□□□□□ -0.08
SMIM11AP58511 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SMIM11AP58511 AC064836.3-201ENST00000607928 673 ntBASIC14.57□□□□□ -0.08
SMIM11AP58511 AC008267.7-201ENST00000624570 1194 ntBASIC14.57□□□□□ -0.08
SMIM11AP58511 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMIM11AP58511 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SMIM11AP58511 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM11AP58511 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM11AP58511 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 KRT8P37-201ENST00000451609 1420 ntBASIC14.57□□□□□ -0.08
SMIM11AP58511 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.57□□□□□ -0.08
SMIM11AP58511 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.57□□□□□ -0.08
SMIM11AP58511 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.57□□□□□ -0.08
SMIM11AP58511 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SMIM11AP58511 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.56□□□□□ -0.08
SMIM11AP58511 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SMIM11AP58511 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms