Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 SERBP1P2-201ENST00000436888 1164 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 RN7SL399P-201ENST00000471648 279 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 AL133499.1-201ENST00000596207 608 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 AL451050.2-201ENST00000606967 682 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 AC021097.1-201ENST00000607902 574 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 AP001350.2-201ENST00000625104 1094 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 AL139011.1-202ENST00000642063 584 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.15□□□□□ -0.3
RIPPLY3P57055 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.15□□□□□ -0.3
RIPPLY3P57055 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RIPPLY3P57055 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RIPPLY3P57055 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.15□□□□□ -0.31
RIPPLY3P57055 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RIPPLY3P57055 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.15□□□□□ -0.31
RIPPLY3P57055 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.15□□□□□ -0.31
RIPPLY3P57055 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 SNX15-201ENST00000352068 771 ntTSL 5 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 BAATP1-201ENST00000412284 1225 ntBASIC13.14□□□□□ -0.31
RIPPLY3P57055 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 RN7SL11P-201ENST00000471305 293 ntBASIC13.14□□□□□ -0.31
RIPPLY3P57055 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 ALG1L13P-202ENST00000519320 584 ntBASIC13.14□□□□□ -0.31
RIPPLY3P57055 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 AC244669.2-201ENST00000612320 853 ntBASIC13.14□□□□□ -0.31
RIPPLY3P57055 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RIPPLY3P57055 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RIPPLY3P57055 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RIPPLY3P57055 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RIPPLY3P57055 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.13□□□□□ -0.31
RIPPLY3P57055 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RIPPLY3P57055 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RIPPLY3P57055 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RIPPLY3P57055 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RIPPLY3P57055 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RIPPLY3P57055 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RIPPLY3P57055 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RIPPLY3P57055 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.13□□□□□ -0.31
RIPPLY3P57055 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.13□□□□□ -0.31
RIPPLY3P57055 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RIPPLY3P57055 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms