Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
CLTCL1P53675 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC22.06■■□□□ 1.12
CLTCL1P53675 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CLTCL1P53675 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC22.06■■□□□ 1.12
CLTCL1P53675 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC22.06■■□□□ 1.12
CLTCL1P53675 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLTCL1P53675 SDCCAG3P2-201ENST00000326105 1023 ntBASIC22.06■■□□□ 1.12
CLTCL1P53675 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC22.06■■□□□ 1.12
CLTCL1P53675 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CLTCL1P53675 GHSR-202ENST00000427970 912 ntBASIC22.06■■□□□ 1.12
CLTCL1P53675 BX284668.4-201ENST00000453917 508 ntBASIC22.06■■□□□ 1.12
CLTCL1P53675 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC22.06■■□□□ 1.12
CLTCL1P53675 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
CLTCL1P53675 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC22.06■■□□□ 1.12
CLTCL1P53675 AC138466.3-201ENST00000619983 221 ntBASIC22.06■■□□□ 1.12
CLTCL1P53675 AL603764.1-201ENST00000636452 321 ntBASIC22.06■■□□□ 1.12
CLTCL1P53675 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC22.05■■□□□ 1.12
CLTCL1P53675 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC22.05■■□□□ 1.12
CLTCL1P53675 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC22.05■■□□□ 1.12
CLTCL1P53675 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CLTCL1P53675 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC22.05■■□□□ 1.12
CLTCL1P53675 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 MST1L-201ENST00000442552 2185 ntBASIC22.05■■□□□ 1.12
CLTCL1P53675 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CLTCL1P53675 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CLTCL1P53675 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC22.05■■□□□ 1.12
CLTCL1P53675 RN7SKP175-201ENST00000408472 289 ntBASIC22.05■■□□□ 1.12
CLTCL1P53675 ARTN-209ENST00000479128 471 ntTSL 3 BASIC22.05■■□□□ 1.12
CLTCL1P53675 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC22.05■■□□□ 1.12
CLTCL1P53675 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC22.05■■□□□ 1.12
CLTCL1P53675 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC22.05■■□□□ 1.12
CLTCL1P53675 INO80C-210ENST00000590757 595 ntTSL 2 BASIC22.05■■□□□ 1.12
CLTCL1P53675 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
CLTCL1P53675 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
CLTCL1P53675 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CLTCL1P53675 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLTCL1P53675 AC099398.1-201ENST00000567919 2776 ntBASIC22.04■■□□□ 1.12
CLTCL1P53675 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC22.04■■□□□ 1.12
CLTCL1P53675 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLTCL1P53675 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLTCL1P53675 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC22.04■■□□□ 1.12
CLTCL1P53675 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CLTCL1P53675 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC22.04■■□□□ 1.12
CLTCL1P53675 AL136309.1-201ENST00000403917 691 ntBASIC22.04■■□□□ 1.12
CLTCL1P53675 RPL5P21-201ENST00000404620 815 ntBASIC22.04■■□□□ 1.12
CLTCL1P53675 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC22.04■■□□□ 1.12
CLTCL1P53675 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC22.04■■□□□ 1.12
CLTCL1P53675 CHMP1AP1-201ENST00000445563 662 ntBASIC22.04■■□□□ 1.12
CLTCL1P53675 TSACC-208ENST00000481479 741 ntTSL 2 BASIC22.04■■□□□ 1.12
CLTCL1P53675 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CLTCL1P53675 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLTCL1P53675 AC020914.3-201ENST00000594712 304 ntBASIC22.04■■□□□ 1.12
CLTCL1P53675 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC22.04■■□□□ 1.12
CLTCL1P53675 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC22.04■■□□□ 1.12
CLTCL1P53675 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLTCL1P53675 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLTCL1P53675 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLTCL1P53675 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC22.03■■□□□ 1.12
CLTCL1P53675 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 SMS-201ENST00000379404 1174 ntTSL 3 BASIC22.03■■□□□ 1.12
CLTCL1P53675 SERPINA13P-202ENST00000478994 924 ntBASIC22.03■■□□□ 1.12
CLTCL1P53675 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC22.03■■□□□ 1.12
CLTCL1P53675 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC22.03■■□□□ 1.12
CLTCL1P53675 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC22.03■■□□□ 1.12
CLTCL1P53675 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CLTCL1P53675 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CLTCL1P53675 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC22.03■■□□□ 1.12
CLTCL1P53675 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC22.03■■□□□ 1.12
CLTCL1P53675 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC22.03■■□□□ 1.12
CLTCL1P53675 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLTCL1P53675 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms