Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LIMK2P53671 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LIMK2P53671 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LIMK2P53671 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.92■□□□□ 0.14
LIMK2P53671 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 AP3S2-216ENST00000617003 1561 ntBASIC15.92■□□□□ 0.14
LIMK2P53671 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.92■□□□□ 0.14
LIMK2P53671 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.92■□□□□ 0.14
LIMK2P53671 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 C18orf15-201ENST00000623680 2534 ntBASIC15.92■□□□□ 0.14
LIMK2P53671 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
LIMK2P53671 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.92■□□□□ 0.14
LIMK2P53671 FAM220BP-201ENST00000377689 816 ntBASIC15.92■□□□□ 0.14
LIMK2P53671 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.92■□□□□ 0.14
LIMK2P53671 AC236430.1-201ENST00000402231 743 ntBASIC15.92■□□□□ 0.14
LIMK2P53671 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LIMK2P53671 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.92■□□□□ 0.14
LIMK2P53671 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.92■□□□□ 0.14
LIMK2P53671 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.92■□□□□ 0.14
LIMK2P53671 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.92■□□□□ 0.14
LIMK2P53671 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LIMK2P53671 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LIMK2P53671 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LIMK2P53671 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.92■□□□□ 0.14
LIMK2P53671 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LIMK2P53671 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.91■□□□□ 0.14
LIMK2P53671 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.91■□□□□ 0.14
LIMK2P53671 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.91■□□□□ 0.14
LIMK2P53671 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
LIMK2P53671 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.91■□□□□ 0.14
LIMK2P53671 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
LIMK2P53671 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LIMK2P53671 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 AC092580.3-201ENST00000430932 139 ntBASIC15.91■□□□□ 0.14
LIMK2P53671 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.91■□□□□ 0.14
LIMK2P53671 AC002472.2-201ENST00000442739 958 ntBASIC15.91■□□□□ 0.14
LIMK2P53671 UGT1A2P-201ENST00000454886 866 ntBASIC15.91■□□□□ 0.14
LIMK2P53671 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LIMK2P53671 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.91■□□□□ 0.14
LIMK2P53671 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.91■□□□□ 0.14
LIMK2P53671 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LIMK2P53671 TERF1P3-201ENST00000505638 1227 ntBASIC15.91■□□□□ 0.14
LIMK2P53671 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.91■□□□□ 0.14
LIMK2P53671 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 AC190387.1-201ENST00000551683 408 ntBASIC15.91■□□□□ 0.14
LIMK2P53671 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.91■□□□□ 0.14
LIMK2P53671 RN7SL204P-201ENST00000582831 262 ntBASIC15.91■□□□□ 0.14
LIMK2P53671 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.91■□□□□ 0.14
LIMK2P53671 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.91■□□□□ 0.14
LIMK2P53671 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LIMK2P53671 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.91■□□□□ 0.14
LIMK2P53671 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 AL136982.4-201ENST00000437689 1740 ntBASIC15.91■□□□□ 0.14
LIMK2P53671 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LIMK2P53671 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.91■□□□□ 0.14
LIMK2P53671 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.9■□□□□ 0.14
LIMK2P53671 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LIMK2P53671 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms