Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC133552.6-201ENST00000613406 534 ntBASIC15.31■□□□□ 0.04
PDX1P52945 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
PDX1P52945 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PDX1P52945 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PDX1P52945 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
PDX1P52945 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PDX1P52945 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PDX1P52945 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PDX1P52945 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.31■□□□□ 0.04
PDX1P52945 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.31■□□□□ 0.04
PDX1P52945 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PDX1P52945 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
PDX1P52945 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.3■□□□□ 0.04
PDX1P52945 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.3■□□□□ 0.04
PDX1P52945 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
PDX1P52945 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 BNIP3P42-201ENST00000454982 569 ntBASIC15.3■□□□□ 0.04
PDX1P52945 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.3■□□□□ 0.04
PDX1P52945 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 AL691432.1-201ENST00000596308 1422 ntBASIC15.3■□□□□ 0.04
PDX1P52945 BNIP3P29-201ENST00000598302 571 ntBASIC15.3■□□□□ 0.04
PDX1P52945 REXO1L6P-201ENST00000603433 1515 ntBASIC15.3■□□□□ 0.04
PDX1P52945 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
PDX1P52945 AC011447.5-201ENST00000616168 564 ntBASIC15.3■□□□□ 0.04
PDX1P52945 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
PDX1P52945 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.3■□□□□ 0.04
PDX1P52945 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDX1P52945 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.3■□□□□ 0.04
PDX1P52945 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
PDX1P52945 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PDX1P52945 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.29■□□□□ 0.04
PDX1P52945 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.29■□□□□ 0.04
PDX1P52945 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.29■□□□□ 0.04
PDX1P52945 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PDX1P52945 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PDX1P52945 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.29■□□□□ 0.04
PDX1P52945 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 AC008894.3-201ENST00000624324 3103 ntBASIC15.29■□□□□ 0.04
PDX1P52945 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.29■□□□□ 0.04
PDX1P52945 AC018665.1-201ENST00000622927 1362 ntBASIC15.29■□□□□ 0.04
PDX1P52945 BOLA2P3-201ENST00000404566 256 ntBASIC15.29■□□□□ 0.04
PDX1P52945 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.29■□□□□ 0.04
PDX1P52945 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PDX1P52945 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.29■□□□□ 0.04
PDX1P52945 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PDX1P52945 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.29■□□□□ 0.04
PDX1P52945 AC036164.1-201ENST00000570544 333 ntBASIC15.29■□□□□ 0.04
PDX1P52945 BTNL10-201ENST00000595971 695 ntBASIC15.29■□□□□ 0.04
PDX1P52945 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.29■□□□□ 0.04
PDX1P52945 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PDX1P52945 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.29■□□□□ 0.04
PDX1P52945 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.29■□□□□ 0.04
PDX1P52945 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDX1P52945 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PDX1P52945 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms