Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BRCA2P51587 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.23■□□□□ 0.35
BRCA2P51587 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC17.23■□□□□ 0.35
BRCA2P51587 AC005740.2-201ENST00000511085 419 ntBASIC17.23■□□□□ 0.35
BRCA2P51587 TMCO5B-205ENST00000530020 894 ntBASIC17.23■□□□□ 0.35
BRCA2P51587 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
BRCA2P51587 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.23■□□□□ 0.35
BRCA2P51587 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BRCA2P51587 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
BRCA2P51587 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.22■□□□□ 0.35
BRCA2P51587 RPL18P13-201ENST00000478088 569 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
BRCA2P51587 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.22■□□□□ 0.35
BRCA2P51587 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.22■□□□□ 0.35
BRCA2P51587 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.22■□□□□ 0.35
BRCA2P51587 MIR4783-201ENST00000580343 82 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 AP003392.6-201ENST00000607709 325 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 ENPP7P14-201ENST00000621765 1040 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 AC068587.8-201ENST00000641239 219 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCA2P51587 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
BRCA2P51587 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCA2P51587 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCA2P51587 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.22■□□□□ 0.35
BRCA2P51587 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BRCA2P51587 AC105137.3-201ENST00000617588 984 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCA2P51587 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.22■□□□□ 0.35
BRCA2P51587 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BRCA2P51587 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
BRCA2P51587 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
BRCA2P51587 ME2P1-201ENST00000426028 1970 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCA2P51587 AL158070.2-201ENST00000623713 1621 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 NOC2LP2-201ENST00000407594 1944 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCA2P51587 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.22■□□□□ 0.35
BRCA2P51587 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC17.22■□□□□ 0.35
BRCA2P51587 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
BRCA2P51587 AP001527.2-201ENST00000614441 631 ntBASIC17.22■□□□□ 0.35
BRCA2P51587 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BRCA2P51587 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.22■□□□□ 0.35
BRCA2P51587 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.22■□□□□ 0.35
BRCA2P51587 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.21■□□□□ 0.35
BRCA2P51587 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCA2P51587 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BRCA2P51587 AC100850.1-201ENST00000506768 649 ntBASIC17.21■□□□□ 0.35
BRCA2P51587 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.21■□□□□ 0.35
BRCA2P51587 AC020922.3-201ENST00000595064 547 ntBASIC17.21■□□□□ 0.35
BRCA2P51587 ZACNP1-201ENST00000612259 710 ntBASIC17.21■□□□□ 0.35
BRCA2P51587 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BRCA2P51587 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCA2P51587 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BRCA2P51587 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.21■□□□□ 0.35
BRCA2P51587 PIN4P1-201ENST00000451079 396 ntBASIC17.21■□□□□ 0.35
BRCA2P51587 AC106794.1-201ENST00000506935 792 ntBASIC17.21■□□□□ 0.35
BRCA2P51587 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC17.21■□□□□ 0.35
BRCA2P51587 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.21■□□□□ 0.35
BRCA2P51587 AL162426.1-201ENST00000624141 743 ntBASIC17.21■□□□□ 0.35
BRCA2P51587 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.21■□□□□ 0.35
BRCA2P51587 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BRCA2P51587 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.21■□□□□ 0.35
BRCA2P51587 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.21■□□□□ 0.35
BRCA2P51587 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BRCA2P51587 GHSR-202ENST00000427970 912 ntBASIC17.21■□□□□ 0.34
BRCA2P51587 AC011742.3-201ENST00000439053 820 ntBASIC17.21■□□□□ 0.34
BRCA2P51587 RNMTL1P1-201ENST00000454103 560 ntBASIC17.21■□□□□ 0.34
BRCA2P51587 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.21■□□□□ 0.34
BRCA2P51587 PLS3-210ENST00000626746 216 ntTSL 4 BASIC17.21■□□□□ 0.34
BRCA2P51587 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
BRCA2P51587 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms