Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CXCL5P42830 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.71□□□□□ -0.69
CXCL5P42830 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.71□□□□□ -0.69
CXCL5P42830 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
CXCL5P42830 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.71□□□□□ -0.69
CXCL5P42830 AC105339.3-201ENST00000560043 636 ntBASIC10.71□□□□□ -0.69
CXCL5P42830 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CXCL5P42830 PRELID1P1-202ENST00000567272 903 ntBASIC10.71□□□□□ -0.69
CXCL5P42830 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CXCL5P42830 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.71□□□□□ -0.69
CXCL5P42830 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC10.71□□□□□ -0.69
CXCL5P42830 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC10.71□□□□□ -0.69
CXCL5P42830 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.71□□□□□ -0.69
CXCL5P42830 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC10.71□□□□□ -0.69
CXCL5P42830 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
CXCL5P42830 TET3-201ENST00000305799 5174 ntTSL 5 BASIC10.71□□□□□ -0.7
CXCL5P42830 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
CXCL5P42830 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
CXCL5P42830 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
CXCL5P42830 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
CXCL5P42830 AC007191.1-201ENST00000623179 2995 ntBASIC10.71□□□□□ -0.7
CXCL5P42830 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
CXCL5P42830 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
CXCL5P42830 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC10.71□□□□□ -0.7
CXCL5P42830 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 SRC-202ENST00000373558 4304 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 AL513480.1-201ENST00000451731 511 ntBASIC10.7□□□□□ -0.7
CXCL5P42830 AC108073.2-201ENST00000464002 357 ntBASIC10.7□□□□□ -0.7
CXCL5P42830 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC10.7□□□□□ -0.7
CXCL5P42830 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.7□□□□□ -0.7
CXCL5P42830 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.7□□□□□ -0.7
CXCL5P42830 ACTL9-202ENST00000612068 1252 ntBASIC10.7□□□□□ -0.7
CXCL5P42830 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 ST20-AS1-201ENST00000560255 4223 ntBASIC10.7□□□□□ -0.7
CXCL5P42830 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CXCL5P42830 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
CXCL5P42830 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
CXCL5P42830 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL5P42830 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CXCL5P42830 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CXCL5P42830 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms