Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.66■□□□□ 0.1
HMGCLP35914 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.66■□□□□ 0.1
HMGCLP35914 TSPY16P-201ENST00000449843 468 ntBASIC15.66■□□□□ 0.1
HMGCLP35914 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 KRT18P43-201ENST00000469825 1281 ntBASIC15.66■□□□□ 0.1
HMGCLP35914 DOC2GP-202ENST00000514950 1163 ntBASIC15.66■□□□□ 0.1
HMGCLP35914 AC015910.1-201ENST00000579400 975 ntBASIC15.66■□□□□ 0.1
HMGCLP35914 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGCLP35914 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGCLP35914 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.66■□□□□ 0.1
HMGCLP35914 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
HMGCLP35914 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HMGCLP35914 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HMGCLP35914 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 AL121723.1-201ENST00000445194 1519 ntBASIC15.65■□□□□ 0.1
HMGCLP35914 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGCLP35914 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.65■□□□□ 0.1
HMGCLP35914 HMGN1P19-201ENST00000436976 333 ntBASIC15.65■□□□□ 0.1
HMGCLP35914 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 SPTLC1P1-201ENST00000447199 261 ntBASIC15.65■□□□□ 0.1
HMGCLP35914 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.65■□□□□ 0.1
HMGCLP35914 AL589987.1-201ENST00000453380 819 ntBASIC15.65■□□□□ 0.1
HMGCLP35914 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.65■□□□□ 0.1
HMGCLP35914 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.65■□□□□ 0.1
HMGCLP35914 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.65■□□□□ 0.1
HMGCLP35914 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.65■□□□□ 0.1
HMGCLP35914 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.65■□□□□ 0.1
HMGCLP35914 AL391069.4-201ENST00000609583 481 ntBASIC15.65■□□□□ 0.1
HMGCLP35914 AC004790.1-201ENST00000612686 536 ntBASIC15.65■□□□□ 0.1
HMGCLP35914 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
HMGCLP35914 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HMGCLP35914 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
HMGCLP35914 AC068418.2-201ENST00000577309 3703 ntBASIC15.65■□□□□ 0.1
HMGCLP35914 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
HMGCLP35914 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.64■□□□□ 0.1
HMGCLP35914 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.64■□□□□ 0.09
HMGCLP35914 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 MEP1AP4-201ENST00000423244 1087 ntBASIC15.64■□□□□ 0.09
HMGCLP35914 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
HMGCLP35914 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGCLP35914 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGCLP35914 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.64■□□□□ 0.09
HMGCLP35914 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HMGCLP35914 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HMGCLP35914 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms