Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.66■□□□□ 0.26
CHKAP35790 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHKAP35790 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHKAP35790 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHKAP35790 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHKAP35790 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHKAP35790 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CHKAP35790 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.66■□□□□ 0.26
CHKAP35790 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.66■□□□□ 0.26
CHKAP35790 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.66■□□□□ 0.26
CHKAP35790 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.66■□□□□ 0.26
CHKAP35790 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHKAP35790 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.66■□□□□ 0.26
CHKAP35790 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.66■□□□□ 0.26
CHKAP35790 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.66■□□□□ 0.26
CHKAP35790 MIR6069-201ENST00000620069 79 ntBASIC16.66■□□□□ 0.26
CHKAP35790 AC006486.2-201ENST00000624246 2199 ntBASIC16.66■□□□□ 0.26
CHKAP35790 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CHKAP35790 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHKAP35790 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.66■□□□□ 0.26
CHKAP35790 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHKAP35790 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.66■□□□□ 0.26
CHKAP35790 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHKAP35790 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHKAP35790 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHKAP35790 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.66■□□□□ 0.26
CHKAP35790 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.65■□□□□ 0.26
CHKAP35790 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.65■□□□□ 0.26
CHKAP35790 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.65■□□□□ 0.26
CHKAP35790 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CHKAP35790 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CHKAP35790 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.65■□□□□ 0.26
CHKAP35790 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.65■□□□□ 0.26
CHKAP35790 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.65■□□□□ 0.26
CHKAP35790 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.65■□□□□ 0.26
CHKAP35790 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 AC009407.1-201ENST00000568958 598 ntBASIC16.65■□□□□ 0.26
CHKAP35790 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.65■□□□□ 0.26
CHKAP35790 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.65■□□□□ 0.26
CHKAP35790 AL033527.5-202ENST00000641632 1098 ntBASIC16.65■□□□□ 0.26
CHKAP35790 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CHKAP35790 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.65■□□□□ 0.26
CHKAP35790 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.65■□□□□ 0.26
CHKAP35790 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CHKAP35790 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHKAP35790 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CHKAP35790 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.64■□□□□ 0.25
CHKAP35790 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHKAP35790 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.64■□□□□ 0.25
CHKAP35790 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CHKAP35790 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHKAP35790 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.64■□□□□ 0.25
CHKAP35790 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.64■□□□□ 0.25
CHKAP35790 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHKAP35790 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.64■□□□□ 0.25
CHKAP35790 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHKAP35790 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CHKAP35790 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHKAP35790 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CHKAP35790 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHKAP35790 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CHKAP35790 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CHKAP35790 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.64■□□□□ 0.25
CHKAP35790 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.64■□□□□ 0.25
CHKAP35790 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.64■□□□□ 0.25
CHKAP35790 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.64■□□□□ 0.25
CHKAP35790 SERBP1P5-201ENST00000510079 1181 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms