Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
LSP1P33241 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
LSP1P33241 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.89■□□□□ 0.13
LSP1P33241 MINOS1P3-201ENST00000457048 203 ntBASIC15.89■□□□□ 0.13
LSP1P33241 BX005266.1-201ENST00000473402 457 ntBASIC15.89■□□□□ 0.13
LSP1P33241 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.89■□□□□ 0.13
LSP1P33241 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.89■□□□□ 0.13
LSP1P33241 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.89■□□□□ 0.13
LSP1P33241 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.89■□□□□ 0.13
LSP1P33241 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.89■□□□□ 0.13
LSP1P33241 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.89■□□□□ 0.13
LSP1P33241 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.89■□□□□ 0.13
LSP1P33241 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LSP1P33241 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LSP1P33241 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LSP1P33241 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.88■□□□□ 0.13
LSP1P33241 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 AP001267.2-201ENST00000532619 2086 ntBASIC15.88■□□□□ 0.13
LSP1P33241 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 AC097376.2-205ENST00000610159 5334 ntBASIC15.88■□□□□ 0.13
LSP1P33241 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
LSP1P33241 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.88■□□□□ 0.13
LSP1P33241 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.88■□□□□ 0.13
LSP1P33241 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LSP1P33241 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 AC114341.1-201ENST00000618070 349 ntBASIC15.88■□□□□ 0.13
LSP1P33241 AL121956.5-201ENST00000625261 221 ntBASIC15.88■□□□□ 0.13
LSP1P33241 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.88■□□□□ 0.13
LSP1P33241 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 TCAF1P1-201ENST00000414990 2232 ntBASIC15.88■□□□□ 0.13
LSP1P33241 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
LSP1P33241 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.88■□□□□ 0.13
LSP1P33241 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LSP1P33241 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.87■□□□□ 0.13
LSP1P33241 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 AC152010.1-201ENST00000415779 2006 ntBASIC15.87■□□□□ 0.13
LSP1P33241 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LSP1P33241 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 PTCHD3P3-201ENST00000403073 906 ntBASIC15.87■□□□□ 0.13
LSP1P33241 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.87■□□□□ 0.13
LSP1P33241 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.87■□□□□ 0.13
LSP1P33241 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.87■□□□□ 0.13
LSP1P33241 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.87■□□□□ 0.13
LSP1P33241 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 AC027612.1-201ENST00000445234 2395 ntBASIC15.87■□□□□ 0.13
LSP1P33241 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.87■□□□□ 0.13
LSP1P33241 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LSP1P33241 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LSP1P33241 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms