Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.04□□□□□ -0.16
HOXC12P31275 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.04□□□□□ -0.16
HOXC12P31275 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.04□□□□□ -0.16
HOXC12P31275 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.04□□□□□ -0.16
HOXC12P31275 AC008738.7-201ENST00000609744 511 ntBASIC14.04□□□□□ -0.16
HOXC12P31275 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
HOXC12P31275 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 AL691432.1-201ENST00000596308 1422 ntBASIC14.04□□□□□ -0.16
HOXC12P31275 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HOXC12P31275 AC084018.2-201ENST00000613093 2607 ntBASIC14.04□□□□□ -0.16
HOXC12P31275 AL596257.1-201ENST00000641463 2694 ntBASIC14.04□□□□□ -0.16
HOXC12P31275 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.04□□□□□ -0.16
HOXC12P31275 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HOXC12P31275 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXC12P31275 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
HOXC12P31275 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXC12P31275 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HOXC12P31275 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
HOXC12P31275 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HOXC12P31275 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 SBF1P1-201ENST00000444527 5631 ntBASIC14.03□□□□□ -0.16
HOXC12P31275 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXC12P31275 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXC12P31275 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXC12P31275 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXC12P31275 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXC12P31275 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXC12P31275 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXC12P31275 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.03□□□□□ -0.16
HOXC12P31275 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.03□□□□□ -0.16
HOXC12P31275 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXC12P31275 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.03□□□□□ -0.16
HOXC12P31275 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 IGHV3-72-202ENST00000621503 303 ntBASIC14.03□□□□□ -0.16
HOXC12P31275 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.03□□□□□ -0.16
HOXC12P31275 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.03□□□□□ -0.16
HOXC12P31275 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.03□□□□□ -0.16
HOXC12P31275 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 AL136982.4-201ENST00000437689 1740 ntBASIC14.03□□□□□ -0.16
HOXC12P31275 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HOXC12P31275 AL596087.1-201ENST00000400979 1969 ntBASIC14.03□□□□□ -0.16
HOXC12P31275 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.03□□□□□ -0.16
HOXC12P31275 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HOXC12P31275 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HOXC12P31275 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HOXC12P31275 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HOXC12P31275 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
HOXC12P31275 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.02□□□□□ -0.16
HOXC12P31275 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
HOXC12P31275 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.02□□□□□ -0.16
HOXC12P31275 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.02□□□□□ -0.16
HOXC12P31275 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HOXC12P31275 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.02□□□□□ -0.16
HOXC12P31275 KRT8P37-201ENST00000451609 1420 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms