Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 Z97180.1-201ENST00000445173 988 ntBASIC19.24■□□□□ 0.67
TM4SF1P30408 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.24■□□□□ 0.67
TM4SF1P30408 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.24■□□□□ 0.67
TM4SF1P30408 AC004066.1-201ENST00000502488 802 ntBASIC19.24■□□□□ 0.67
TM4SF1P30408 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC19.24■□□□□ 0.67
TM4SF1P30408 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TM4SF1P30408 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.24■□□□□ 0.67
TM4SF1P30408 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.24■□□□□ 0.67
TM4SF1P30408 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF1P30408 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.24■□□□□ 0.67
TM4SF1P30408 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
TM4SF1P30408 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TM4SF1P30408 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.24■□□□□ 0.67
TM4SF1P30408 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM4SF1P30408 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF1P30408 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF1P30408 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF1P30408 ACTG1P2-201ENST00000415776 1125 ntBASIC19.23■□□□□ 0.67
TM4SF1P30408 ACTG1P11-201ENST00000425411 1125 ntBASIC19.23■□□□□ 0.67
TM4SF1P30408 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF1P30408 EEF1DP6-201ENST00000449232 372 ntBASIC19.23■□□□□ 0.67
TM4SF1P30408 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC19.23■□□□□ 0.67
TM4SF1P30408 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC19.23■□□□□ 0.67
TM4SF1P30408 AC005740.2-201ENST00000511085 419 ntBASIC19.23■□□□□ 0.67
TM4SF1P30408 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.23■□□□□ 0.67
TM4SF1P30408 MIR7845-201ENST00000618396 99 ntBASIC19.23■□□□□ 0.67
TM4SF1P30408 AL023803.2-201ENST00000620080 638 ntBASIC19.23■□□□□ 0.67
TM4SF1P30408 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TM4SF1P30408 AC100757.4-201ENST00000626934 759 ntBASIC19.23■□□□□ 0.67
TM4SF1P30408 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.23■□□□□ 0.67
TM4SF1P30408 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.23■□□□□ 0.67
TM4SF1P30408 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TM4SF1P30408 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.23■□□□□ 0.67
TM4SF1P30408 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 KRT8P29-201ENST00000420409 1371 ntBASIC19.22■□□□□ 0.67
TM4SF1P30408 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.22■□□□□ 0.67
TM4SF1P30408 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TM4SF1P30408 RPL17P11-201ENST00000417593 544 ntBASIC19.22■□□□□ 0.67
TM4SF1P30408 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.22■□□□□ 0.67
TM4SF1P30408 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.22■□□□□ 0.67
TM4SF1P30408 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 NUP210P1-202ENST00000504322 710 ntBASIC19.22■□□□□ 0.67
TM4SF1P30408 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.22■□□□□ 0.67
TM4SF1P30408 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TM4SF1P30408 BNIP3P13-201ENST00000599968 566 ntBASIC19.22■□□□□ 0.67
TM4SF1P30408 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.22■□□□□ 0.67
TM4SF1P30408 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TM4SF1P30408 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.21■□□□□ 0.67
TM4SF1P30408 AL596087.1-201ENST00000400979 1969 ntBASIC19.21■□□□□ 0.67
TM4SF1P30408 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TM4SF1P30408 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF1P30408 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF1P30408 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TM4SF1P30408 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms