Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC097359.3-201ENST00000603982 1210 ntBASIC13.33□□□□□ -0.28
COL8A2P25067 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 AL591163.1-201ENST00000641757 987 ntBASIC13.33□□□□□ -0.28
COL8A2P25067 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.33□□□□□ -0.28
COL8A2P25067 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.33□□□□□ -0.28
COL8A2P25067 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 AC105917.1-201ENST00000506637 2539 ntBASIC13.33□□□□□ -0.28
COL8A2P25067 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
COL8A2P25067 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
COL8A2P25067 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 AL607033.1-201ENST00000623900 1599 ntBASIC13.32□□□□□ -0.28
COL8A2P25067 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
COL8A2P25067 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
COL8A2P25067 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.32□□□□□ -0.28
COL8A2P25067 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 GK-202ENST00000378941 458 ntTSL 3 BASIC13.32□□□□□ -0.28
COL8A2P25067 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.32□□□□□ -0.28
COL8A2P25067 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 HNRNPUP1-201ENST00000554987 333 ntBASIC13.32□□□□□ -0.28
COL8A2P25067 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.32□□□□□ -0.28
COL8A2P25067 RRP7BP-205ENST00000566851 833 ntBASIC13.32□□□□□ -0.28
COL8A2P25067 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.32□□□□□ -0.28
COL8A2P25067 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
COL8A2P25067 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 TMEM261P1-201ENST00000604899 340 ntBASIC13.32□□□□□ -0.28
COL8A2P25067 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.32□□□□□ -0.28
COL8A2P25067 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
COL8A2P25067 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.32□□□□□ -0.28
COL8A2P25067 CDC14C-201ENST00000428251 1719 ntBASIC13.32□□□□□ -0.28
COL8A2P25067 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.32□□□□□ -0.28
COL8A2P25067 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
COL8A2P25067 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.32□□□□□ -0.28
COL8A2P25067 CYP2T1P-202ENST00000641596 2535 ntBASIC13.32□□□□□ -0.28
COL8A2P25067 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
COL8A2P25067 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.31□□□□□ -0.28
COL8A2P25067 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.31□□□□□ -0.28
COL8A2P25067 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
COL8A2P25067 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms