Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.35■□□□□ 0.37
SMPD1P17405 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMPD1P17405 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMPD1P17405 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.34■□□□□ 0.37
SMPD1P17405 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 PCDH8P1-201ENST00000428983 2773 ntBASIC17.34■□□□□ 0.37
SMPD1P17405 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.34■□□□□ 0.37
SMPD1P17405 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.34■□□□□ 0.37
SMPD1P17405 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.34■□□□□ 0.37
SMPD1P17405 AP001258.2-201ENST00000529891 490 ntBASIC17.34■□□□□ 0.37
SMPD1P17405 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMPD1P17405 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.34■□□□□ 0.37
SMPD1P17405 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.34■□□□□ 0.37
SMPD1P17405 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.34■□□□□ 0.37
SMPD1P17405 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 AC005695.3-201ENST00000614522 232 ntBASIC17.34■□□□□ 0.37
SMPD1P17405 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SMPD1P17405 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.34■□□□□ 0.37
SMPD1P17405 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.33■□□□□ 0.37
SMPD1P17405 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.33■□□□□ 0.37
SMPD1P17405 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMPD1P17405 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMPD1P17405 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMPD1P17405 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.33■□□□□ 0.37
SMPD1P17405 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SMPD1P17405 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMPD1P17405 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
SMPD1P17405 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SMPD1P17405 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMPD1P17405 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SMPD1P17405 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.33■□□□□ 0.36
SMPD1P17405 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.33■□□□□ 0.36
SMPD1P17405 RPSAP36-202ENST00000494591 1261 ntBASIC17.33■□□□□ 0.36
SMPD1P17405 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.33■□□□□ 0.36
SMPD1P17405 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.33■□□□□ 0.36
SMPD1P17405 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.33■□□□□ 0.36
SMPD1P17405 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.33■□□□□ 0.36
SMPD1P17405 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.33■□□□□ 0.36
SMPD1P17405 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 AL008638.5-201ENST00000623814 1298 ntBASIC17.33■□□□□ 0.36
SMPD1P17405 PRSS30P-206ENST00000641773 873 ntBASIC17.33■□□□□ 0.36
SMPD1P17405 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SMPD1P17405 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.33■□□□□ 0.36
SMPD1P17405 LINC02447-202ENST00000501888 2146 ntBASIC17.33■□□□□ 0.36
SMPD1P17405 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.33■□□□□ 0.36
SMPD1P17405 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.33■□□□□ 0.36
SMPD1P17405 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.33■□□□□ 0.36
SMPD1P17405 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SMPD1P17405 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMPD1P17405 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMPD1P17405 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMPD1P17405 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.32■□□□□ 0.36
SMPD1P17405 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMPD1P17405 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMPD1P17405 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms