Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL1P09341 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 CHCHD2P8-201ENST00000429873 447 ntBASIC12.29□□□□□ -0.44
CXCL1P09341 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.29□□□□□ -0.44
CXCL1P09341 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.29□□□□□ -0.44
CXCL1P09341 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL1P09341 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
CXCL1P09341 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.29□□□□□ -0.44
CXCL1P09341 AL136038.3-201ENST00000561909 1096 ntBASIC12.29□□□□□ -0.44
CXCL1P09341 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.29□□□□□ -0.44
CXCL1P09341 Z69720.1-201ENST00000601483 472 ntBASIC12.29□□□□□ -0.44
CXCL1P09341 AL353135.1-201ENST00000606729 504 ntBASIC12.29□□□□□ -0.44
CXCL1P09341 AC010331.1-201ENST00000611423 582 ntBASIC12.29□□□□□ -0.44
CXCL1P09341 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
CXCL1P09341 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CXCL1P09341 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
CXCL1P09341 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL1P09341 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CXCL1P09341 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
CXCL1P09341 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 AL590787.1-201ENST00000568856 1315 ntBASIC12.29□□□□□ -0.44
CXCL1P09341 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL1P09341 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL1P09341 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL1P09341 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CXCL1P09341 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL1P09341 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL1P09341 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.29□□□□□ -0.44
CXCL1P09341 MST1P2-201ENST00000457982 2291 ntBASIC12.28□□□□□ -0.44
CXCL1P09341 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CXCL1P09341 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 AL023775.1-201ENST00000454907 1746 ntBASIC12.28□□□□□ -0.44
CXCL1P09341 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CXCL1P09341 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
CXCL1P09341 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
CXCL1P09341 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CXCL1P09341 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL1P09341 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL1P09341 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
CXCL1P09341 AC005521.1-201ENST00000393351 872 ntBASIC12.28□□□□□ -0.44
CXCL1P09341 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.28□□□□□ -0.44
CXCL1P09341 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 CDV3-207ENST00000508481 661 ntTSL 3 BASIC12.28□□□□□ -0.44
CXCL1P09341 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 MIR4492-201ENST00000581627 80 ntBASIC12.28□□□□□ -0.44
CXCL1P09341 AL121672.3-201ENST00000608644 468 ntBASIC12.28□□□□□ -0.44
CXCL1P09341 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL1P09341 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 AC023024.2-201ENST00000623561 1993 ntBASIC12.28□□□□□ -0.44
CXCL1P09341 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.28□□□□□ -0.44
CXCL1P09341 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CXCL1P09341 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CXCL1P09341 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 CICP11-201ENST00000434745 2827 ntBASIC12.28□□□□□ -0.44
CXCL1P09341 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CXCL1P09341 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.28□□□□□ -0.44
CXCL1P09341 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CXCL1P09341 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL1P09341 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
CXCL1P09341 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL1P09341 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.27□□□□□ -0.44
CXCL1P09341 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL1P09341 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL1P09341 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL1P09341 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CXCL1P09341 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms