Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
CD48P09326 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.33■□□□□ 0.21
CD48P09326 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD48P09326 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD48P09326 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD48P09326 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CD48P09326 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CD48P09326 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.33■□□□□ 0.2
CD48P09326 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.33■□□□□ 0.2
CD48P09326 KRT18P64-201ENST00000434946 1219 ntBASIC16.33■□□□□ 0.2
CD48P09326 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.33■□□□□ 0.2
CD48P09326 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.33■□□□□ 0.2
CD48P09326 AL512361.1-201ENST00000554200 418 ntBASIC16.33■□□□□ 0.2
CD48P09326 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.33■□□□□ 0.2
CD48P09326 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.33■□□□□ 0.2
CD48P09326 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CD48P09326 AC051619.7-201ENST00000568314 623 ntBASIC16.33■□□□□ 0.2
CD48P09326 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.33■□□□□ 0.2
CD48P09326 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 TEX28P1-201ENST00000613479 1221 ntBASIC16.33■□□□□ 0.2
CD48P09326 TEX28P2-201ENST00000617764 1221 ntBASIC16.33■□□□□ 0.2
CD48P09326 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.33■□□□□ 0.2
CD48P09326 AL033527.5-202ENST00000641632 1098 ntBASIC16.33■□□□□ 0.2
CD48P09326 AC079781.4-201ENST00000641908 219 ntBASIC16.33■□□□□ 0.2
CD48P09326 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 FO538757.1-201ENST00000623083 1397 ntBASIC16.33■□□□□ 0.2
CD48P09326 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.33■□□□□ 0.2
CD48P09326 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.33■□□□□ 0.2
CD48P09326 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD48P09326 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CD48P09326 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CD48P09326 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD48P09326 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.32■□□□□ 0.2
CD48P09326 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CD48P09326 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CD48P09326 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.32■□□□□ 0.2
CD48P09326 CNN2P2-201ENST00000443536 909 ntBASIC16.32■□□□□ 0.2
CD48P09326 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 CNN2P3-201ENST00000450201 906 ntBASIC16.32■□□□□ 0.2
CD48P09326 AC125807.1-201ENST00000483097 614 ntBASIC16.32■□□□□ 0.2
CD48P09326 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.32■□□□□ 0.2
CD48P09326 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 AC025048.3-201ENST00000590609 569 ntBASIC16.32■□□□□ 0.2
CD48P09326 AC005702.4-201ENST00000618393 416 ntBASIC16.32■□□□□ 0.2
CD48P09326 AL136317.3-201ENST00000618497 906 ntBASIC16.32■□□□□ 0.2
CD48P09326 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.32■□□□□ 0.2
CD48P09326 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.32■□□□□ 0.2
CD48P09326 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 LINC02228-204ENST00000642115 2962 ntBASIC16.32■□□□□ 0.2
CD48P09326 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CD48P09326 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD48P09326 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.32■□□□□ 0.2
CD48P09326 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD48P09326 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD48P09326 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms