Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 DUX4L47-201ENST00000566374 394 ntBASIC20.27■□□□□ 0.84
COL5A2P05997 MIR4683-201ENST00000579659 81 ntBASIC20.27■□□□□ 0.84
COL5A2P05997 CENPX-208ENST00000584347 799 ntTSL 2 BASIC20.27■□□□□ 0.84
COL5A2P05997 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.27■□□□□ 0.84
COL5A2P05997 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.27■□□□□ 0.84
COL5A2P05997 AL358472.3-201ENST00000608147 415 ntBASIC20.27■□□□□ 0.84
COL5A2P05997 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC20.27■□□□□ 0.84
COL5A2P05997 AC004923.1-202ENST00000642106 209 ntBASIC20.27■□□□□ 0.84
COL5A2P05997 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL5A2P05997 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL5A2P05997 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
COL5A2P05997 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COL5A2P05997 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COL5A2P05997 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL5A2P05997 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL5A2P05997 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL5A2P05997 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
COL5A2P05997 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
COL5A2P05997 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL5A2P05997 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.26■□□□□ 0.83
COL5A2P05997 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
COL5A2P05997 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
COL5A2P05997 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.26■□□□□ 0.83
COL5A2P05997 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL5A2P05997 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC20.26■□□□□ 0.83
COL5A2P05997 AL355334.1-201ENST00000417713 215 ntBASIC20.26■□□□□ 0.83
COL5A2P05997 ISCA2P1-201ENST00000425548 448 ntBASIC20.26■□□□□ 0.83
COL5A2P05997 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC20.26■□□□□ 0.83
COL5A2P05997 RN7SL181P-201ENST00000462921 277 ntBASIC20.26■□□□□ 0.83
COL5A2P05997 LY6E-208ENST00000520531 490 ntTSL 2 BASIC20.26■□□□□ 0.83
COL5A2P05997 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC20.26■□□□□ 0.83
COL5A2P05997 MIR3147-201ENST00000577811 66 ntBASIC20.26■□□□□ 0.83
COL5A2P05997 AC020922.3-201ENST00000595064 547 ntBASIC20.26■□□□□ 0.83
COL5A2P05997 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.26■□□□□ 0.83
COL5A2P05997 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
COL5A2P05997 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.26■□□□□ 0.83
COL5A2P05997 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COL5A2P05997 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
COL5A2P05997 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 AP000593.2-201ENST00000542775 1433 ntBASIC20.26■□□□□ 0.83
COL5A2P05997 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL5A2P05997 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC20.25■□□□□ 0.83
COL5A2P05997 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
COL5A2P05997 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.25■□□□□ 0.83
COL5A2P05997 RN7SKP175-201ENST00000408472 289 ntBASIC20.25■□□□□ 0.83
COL5A2P05997 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.25■□□□□ 0.83
COL5A2P05997 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC20.25■□□□□ 0.83
COL5A2P05997 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC20.25■□□□□ 0.83
COL5A2P05997 MTHFR-217ENST00000641820 1569 ntBASIC20.25■□□□□ 0.83
COL5A2P05997 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL5A2P05997 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.25■□□□□ 0.83
COL5A2P05997 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
COL5A2P05997 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.25■□□□□ 0.83
COL5A2P05997 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL5A2P05997 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC20.25■□□□□ 0.83
COL5A2P05997 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL5A2P05997 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
COL5A2P05997 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL5A2P05997 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COL5A2P05997 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.24■□□□□ 0.83
COL5A2P05997 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC20.24■□□□□ 0.83
COL5A2P05997 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC20.24■□□□□ 0.83
COL5A2P05997 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.24■□□□□ 0.83
COL5A2P05997 AC090164.2-201ENST00000611487 516 ntBASIC20.24■□□□□ 0.83
COL5A2P05997 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL5A2P05997 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.24■□□□□ 0.83
COL5A2P05997 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.24■□□□□ 0.83
COL5A2P05997 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL5A2P05997 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL5A2P05997 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms