Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 AC026396.1-201ENST00000419388 421 ntBASIC14.04□□□□□ -0.16
APOC1P02654 MCCD1P2-201ENST00000423228 335 ntBASIC14.04□□□□□ -0.16
APOC1P02654 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
APOC1P02654 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 RNA5SP410-201ENST00000516285 106 ntBASIC14.04□□□□□ -0.16
APOC1P02654 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.04□□□□□ -0.16
APOC1P02654 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.04□□□□□ -0.16
APOC1P02654 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.04□□□□□ -0.16
APOC1P02654 AC061975.2-201ENST00000581722 295 ntBASIC14.04□□□□□ -0.16
APOC1P02654 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.04□□□□□ -0.16
APOC1P02654 AC026120.1-201ENST00000611536 926 ntBASIC14.04□□□□□ -0.16
APOC1P02654 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
APOC1P02654 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
APOC1P02654 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.04□□□□□ -0.16
APOC1P02654 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
APOC1P02654 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.03□□□□□ -0.16
APOC1P02654 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 TNRC18P2-201ENST00000417666 2714 ntBASIC14.03□□□□□ -0.16
APOC1P02654 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 PRAL-201ENST00000624952 3286 ntBASIC14.03□□□□□ -0.16
APOC1P02654 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 MKNK2P1-201ENST00000437526 628 ntBASIC14.03□□□□□ -0.16
APOC1P02654 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 AL138918.1-201ENST00000568306 659 ntBASIC14.03□□□□□ -0.16
APOC1P02654 MTDHP5-201ENST00000598980 586 ntBASIC14.03□□□□□ -0.16
APOC1P02654 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.03□□□□□ -0.16
APOC1P02654 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.03□□□□□ -0.16
APOC1P02654 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 AC022532.1-201ENST00000624563 1728 ntBASIC14.03□□□□□ -0.16
APOC1P02654 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
APOC1P02654 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
APOC1P02654 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.03□□□□□ -0.16
APOC1P02654 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
APOC1P02654 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
APOC1P02654 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
APOC1P02654 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC1P02654 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC1P02654 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
APOC1P02654 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC1P02654 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
APOC1P02654 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.02□□□□□ -0.16
APOC1P02654 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC1P02654 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
APOC1P02654 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC1P02654 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
APOC1P02654 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC1P02654 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
APOC1P02654 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.02□□□□□ -0.16
APOC1P02654 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
APOC1P02654 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.02□□□□□ -0.16
APOC1P02654 AL691432.1-201ENST00000596308 1422 ntBASIC14.02□□□□□ -0.16
APOC1P02654 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
APOC1P02654 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
APOC1P02654 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.02□□□□□ -0.17
APOC1P02654 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.02□□□□□ -0.17
APOC1P02654 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.02□□□□□ -0.17
APOC1P02654 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC1P02654 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.02□□□□□ -0.17
APOC1P02654 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.02□□□□□ -0.17
APOC1P02654 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.02□□□□□ -0.17
APOC1P02654 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.02□□□□□ -0.17
APOC1P02654 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC1P02654 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.02□□□□□ -0.17
APOC1P02654 C20orf181-201ENST00000623918 480 ntBASIC14.02□□□□□ -0.17
APOC1P02654 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms