Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 AC092474.2-201ENST00000424288 719 ntBASIC11.91□□□□□ -0.5
LTAP01374 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 PRSS29P-201ENST00000440800 595 ntBASIC11.91□□□□□ -0.5
LTAP01374 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.91□□□□□ -0.5
LTAP01374 SAPCD2P3-201ENST00000455031 850 ntBASIC11.91□□□□□ -0.5
LTAP01374 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.91□□□□□ -0.5
LTAP01374 PRYP6-201ENST00000514804 343 ntBASIC11.91□□□□□ -0.5
LTAP01374 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11.91□□□□□ -0.5
LTAP01374 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.91□□□□□ -0.5
LTAP01374 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC11.91□□□□□ -0.5
LTAP01374 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
LTAP01374 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.91□□□□□ -0.5
LTAP01374 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.91□□□□□ -0.5
LTAP01374 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 AC041040.2-201ENST00000622926 2899 ntBASIC11.91□□□□□ -0.5
LTAP01374 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
LTAP01374 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.91□□□□□ -0.5
LTAP01374 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LTAP01374 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.9□□□□□ -0.5
LTAP01374 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC11.9□□□□□ -0.5
LTAP01374 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
LTAP01374 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.9□□□□□ -0.5
LTAP01374 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LTAP01374 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.9□□□□□ -0.5
LTAP01374 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms