Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.47■□□□□ 0.23
BEST1O76090 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.47■□□□□ 0.23
BEST1O76090 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.47■□□□□ 0.23
BEST1O76090 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.47■□□□□ 0.23
BEST1O76090 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.47■□□□□ 0.23
BEST1O76090 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BEST1O76090 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BEST1O76090 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
BEST1O76090 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
BEST1O76090 AC090616.6-203ENST00000579186 1945 ntBASIC16.47■□□□□ 0.23
BEST1O76090 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.47■□□□□ 0.23
BEST1O76090 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST1O76090 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
BEST1O76090 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
BEST1O76090 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
BEST1O76090 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST1O76090 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST1O76090 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST1O76090 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
BEST1O76090 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
BEST1O76090 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST1O76090 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST1O76090 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
BEST1O76090 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
BEST1O76090 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.46■□□□□ 0.23
BEST1O76090 INE1-201ENST00000456273 945 ntBASIC16.46■□□□□ 0.23
BEST1O76090 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.46■□□□□ 0.23
BEST1O76090 AL359711.2-201ENST00000563105 872 ntBASIC16.46■□□□□ 0.23
BEST1O76090 AL049840.4-201ENST00000602422 811 ntBASIC16.46■□□□□ 0.23
BEST1O76090 AL035252.4-201ENST00000624174 288 ntBASIC16.46■□□□□ 0.23
BEST1O76090 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
BEST1O76090 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.46■□□□□ 0.23
BEST1O76090 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.46■□□□□ 0.23
BEST1O76090 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BEST1O76090 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
BEST1O76090 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
BEST1O76090 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
BEST1O76090 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
BEST1O76090 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 AC098614.1-201ENST00000368528 745 ntBASIC16.45■□□□□ 0.22
BEST1O76090 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST1O76090 AP006294.1-201ENST00000415407 339 ntBASIC16.45■□□□□ 0.22
BEST1O76090 AC005034.1-201ENST00000426657 489 ntBASIC16.45■□□□□ 0.22
BEST1O76090 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 GAPDHP21-201ENST00000450301 1010 ntBASIC16.45■□□□□ 0.22
BEST1O76090 VDAC1P7-201ENST00000462417 847 ntBASIC16.45■□□□□ 0.22
BEST1O76090 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST1O76090 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST1O76090 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST1O76090 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST1O76090 AC132938.2-201ENST00000579188 680 ntBASIC16.45■□□□□ 0.22
BEST1O76090 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 AL358472.5-202ENST00000641448 1267 ntBASIC16.45■□□□□ 0.22
BEST1O76090 AL591163.1-201ENST00000641757 987 ntBASIC16.45■□□□□ 0.22
BEST1O76090 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST1O76090 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST1O76090 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST1O76090 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms