Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.32■□□□□ 0.52
CTNND1O60716 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CTNND1O60716 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.31■□□□□ 0.52
CTNND1O60716 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.31■□□□□ 0.52
CTNND1O60716 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC18.31■□□□□ 0.52
CTNND1O60716 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 AC006001.1-201ENST00000325130 474 ntBASIC18.31■□□□□ 0.52
CTNND1O60716 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CTNND1O60716 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.31■□□□□ 0.52
CTNND1O60716 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.31■□□□□ 0.52
CTNND1O60716 KRT18P25-201ENST00000508931 1278 ntBASIC18.31■□□□□ 0.52
CTNND1O60716 AHRR-211ENST00000515206 462 ntTSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CTNND1O60716 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.31■□□□□ 0.52
CTNND1O60716 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CTNND1O60716 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CTNND1O60716 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CTNND1O60716 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.3■□□□□ 0.52
CTNND1O60716 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.3■□□□□ 0.52
CTNND1O60716 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CTNND1O60716 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.3■□□□□ 0.52
CTNND1O60716 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.3■□□□□ 0.52
CTNND1O60716 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.3■□□□□ 0.52
CTNND1O60716 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CTNND1O60716 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.3■□□□□ 0.52
CTNND1O60716 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC18.3■□□□□ 0.52
CTNND1O60716 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.3■□□□□ 0.52
CTNND1O60716 MIR4313-201ENST00000580760 101 ntBASIC18.3■□□□□ 0.52
CTNND1O60716 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.3■□□□□ 0.52
CTNND1O60716 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.3■□□□□ 0.52
CTNND1O60716 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 AC132938.4-201ENST00000623835 848 ntBASIC18.3■□□□□ 0.52
CTNND1O60716 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.3■□□□□ 0.52
CTNND1O60716 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CTNND1O60716 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 AL138799.1-201ENST00000448213 1675 ntBASIC18.3■□□□□ 0.52
CTNND1O60716 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.3■□□□□ 0.52
CTNND1O60716 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.3■□□□□ 0.52
CTNND1O60716 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CTNND1O60716 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.3■□□□□ 0.52
CTNND1O60716 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CTNND1O60716 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.3■□□□□ 0.52
CTNND1O60716 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CTNND1O60716 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CTNND1O60716 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CTNND1O60716 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CTNND1O60716 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.29■□□□□ 0.52
CTNND1O60716 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CTNND1O60716 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18.29■□□□□ 0.52
CTNND1O60716 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.29■□□□□ 0.52
CTNND1O60716 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CTNND1O60716 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms