Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 AL442647.2-201ENST00000429864 857 ntBASIC15.66■□□□□ 0.1
PCDHGA12O60330 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 CROCCP4-201ENST00000457096 498 ntBASIC15.66■□□□□ 0.1
PCDHGA12O60330 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 AC036164.1-201ENST00000570544 333 ntBASIC15.66■□□□□ 0.1
PCDHGA12O60330 MIR4525-201ENST00000580000 75 ntBASIC15.66■□□□□ 0.1
PCDHGA12O60330 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 AL391069.4-201ENST00000609583 481 ntBASIC15.66■□□□□ 0.1
PCDHGA12O60330 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 REXO1L6P-201ENST00000603433 1515 ntBASIC15.66■□□□□ 0.1
PCDHGA12O60330 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA12O60330 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA12O60330 AC005622.1-201ENST00000636801 1703 ntBASIC15.65■□□□□ 0.1
PCDHGA12O60330 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 ANKRD19P-201ENST00000338192 862 ntBASIC15.65■□□□□ 0.1
PCDHGA12O60330 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 AL162726.2-201ENST00000438986 1017 ntBASIC15.65■□□□□ 0.1
PCDHGA12O60330 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 RPSAP52-203ENST00000622976 1023 ntBASIC15.65■□□□□ 0.1
PCDHGA12O60330 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA12O60330 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA12O60330 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
PCDHGA12O60330 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.64■□□□□ 0.1
PCDHGA12O60330 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA12O60330 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGA12O60330 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 FAM86MP-201ENST00000340703 885 ntBASIC15.64■□□□□ 0.09
PCDHGA12O60330 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCDHGA12O60330 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA12O60330 MST1L-201ENST00000442552 2185 ntBASIC15.64■□□□□ 0.09
PCDHGA12O60330 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA12O60330 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms