Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
ACTN4O43707 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
ACTN4O43707 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.68■□□□□ 0.42
ACTN4O43707 AC074338.1-201ENST00000416825 156 ntBASIC17.68■□□□□ 0.42
ACTN4O43707 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.68■□□□□ 0.42
ACTN4O43707 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.68■□□□□ 0.42
ACTN4O43707 AC017007.3-201ENST00000479865 435 ntBASIC17.68■□□□□ 0.42
ACTN4O43707 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.68■□□□□ 0.42
ACTN4O43707 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
ACTN4O43707 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.68■□□□□ 0.42
ACTN4O43707 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
ACTN4O43707 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
ACTN4O43707 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.68■□□□□ 0.42
ACTN4O43707 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.68■□□□□ 0.42
ACTN4O43707 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
ACTN4O43707 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.68■□□□□ 0.42
ACTN4O43707 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.68■□□□□ 0.42
ACTN4O43707 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ACTN4O43707 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ACTN4O43707 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.67■□□□□ 0.42
ACTN4O43707 AL035456.1-201ENST00000456064 1369 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 AGAP7P-201ENST00000582299 2062 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 AGAP14-201ENST00000624701 2060 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.67■□□□□ 0.42
ACTN4O43707 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.67■□□□□ 0.42
ACTN4O43707 AC148477.4-201ENST00000613430 1793 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ACTN4O43707 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
ACTN4O43707 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.67■□□□□ 0.42
ACTN4O43707 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.67■□□□□ 0.42
ACTN4O43707 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.67■□□□□ 0.42
ACTN4O43707 TARDBPP1-201ENST00000442013 1203 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ACTN4O43707 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 AP001059.3-201ENST00000619053 235 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.67■□□□□ 0.42
ACTN4O43707 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.67■□□□□ 0.42
ACTN4O43707 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 CICP24-201ENST00000605464 2705 ntBASIC17.67■□□□□ 0.42
ACTN4O43707 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.67■□□□□ 0.42
ACTN4O43707 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ACTN4O43707 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.66■□□□□ 0.42
ACTN4O43707 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ACTN4O43707 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 TSPY26P-202ENST00000565928 3884 ntBASIC17.66■□□□□ 0.42
ACTN4O43707 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTN4O43707 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.66■□□□□ 0.42
ACTN4O43707 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.66■□□□□ 0.42
ACTN4O43707 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ACTN4O43707 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ACTN4O43707 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms