Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.12■□□□□ 0.01
PCDH17O14917 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PCDH17O14917 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PCDH17O14917 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH17O14917 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PCDH17O14917 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH17O14917 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
PCDH17O14917 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
PCDH17O14917 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH17O14917 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH17O14917 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 AC027307.3-201ENST00000594262 1100 ntBASIC15.11■□□□□ 0.01
PCDH17O14917 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PCDH17O14917 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH17O14917 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH17O14917 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.11■□□□□ 0.01
PCDH17O14917 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
PCDH17O14917 C8orf49-201ENST00000525043 1968 ntBASIC15.11■□□□□ 0.01
PCDH17O14917 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.11■□□□□ 0.01
PCDH17O14917 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PCDH17O14917 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.11■□□□□ 0.01
PCDH17O14917 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PCDH17O14917 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDH17O14917 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.1■□□□□ 0.01
PCDH17O14917 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDH17O14917 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDH17O14917 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDH17O14917 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PCDH17O14917 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDH17O14917 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms