Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.87■□□□□ 0.29
FOXN3O00409 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
FOXN3O00409 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
FOXN3O00409 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 HLA-V-204ENST00000476601 1289 ntBASIC16.87■□□□□ 0.29
FOXN3O00409 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.87■□□□□ 0.29
FOXN3O00409 AL138828.2-201ENST00000615812 383 ntBASIC16.87■□□□□ 0.29
FOXN3O00409 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXN3O00409 SPDYE12P-201ENST00000618416 771 ntBASIC16.87■□□□□ 0.29
FOXN3O00409 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXN3O00409 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FOXN3O00409 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.87■□□□□ 0.29
FOXN3O00409 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.87■□□□□ 0.29
FOXN3O00409 AC006058.4-201ENST00000624016 1670 ntBASIC16.87■□□□□ 0.29
FOXN3O00409 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
FOXN3O00409 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FOXN3O00409 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXN3O00409 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXN3O00409 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXN3O00409 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
FOXN3O00409 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXN3O00409 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXN3O00409 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXN3O00409 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXN3O00409 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXN3O00409 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXN3O00409 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXN3O00409 AC025678.2-201ENST00000562061 970 ntBASIC16.86■□□□□ 0.29
FOXN3O00409 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
FOXN3O00409 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.86■□□□□ 0.29
FOXN3O00409 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXN3O00409 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXN3O00409 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXN3O00409 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXN3O00409 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 Z97205.2-201ENST00000564697 1639 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXN3O00409 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXN3O00409 AC023824.1-201ENST00000562945 2975 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXN3O00409 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
FOXN3O00409 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXN3O00409 CNN2P2-201ENST00000443536 909 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXN3O00409 CNN2P3-201ENST00000450201 906 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXN3O00409 AC051619.7-201ENST00000568314 623 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.85■□□□□ 0.29
FOXN3O00409 AC025048.3-201ENST00000590609 569 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 TEX28P1-201ENST00000613479 1221 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 TEX28P2-201ENST00000617764 1221 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 AC005702.4-201ENST00000618393 416 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 AL136317.3-201ENST00000618497 906 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXN3O00409 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FOXN3O00409 FO538757.1-201ENST00000623083 1397 ntBASIC16.85■□□□□ 0.29
FOXN3O00409 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms