Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 AC011270.2-201ENST00000624293 2550 ntBASIC15.62■□□□□ 0.09
TLR4O00206 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.62■□□□□ 0.09
TLR4O00206 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TLR4O00206 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
TLR4O00206 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 HAUS4P1-201ENST00000406739 1145 ntBASIC15.62■□□□□ 0.09
TLR4O00206 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.62■□□□□ 0.09
TLR4O00206 ACTG1P3-201ENST00000431775 1114 ntBASIC15.62■□□□□ 0.09
TLR4O00206 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.62■□□□□ 0.09
TLR4O00206 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.62■□□□□ 0.09
TLR4O00206 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.62■□□□□ 0.09
TLR4O00206 AL359711.2-201ENST00000563105 872 ntBASIC15.62■□□□□ 0.09
TLR4O00206 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.62■□□□□ 0.09
TLR4O00206 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.62■□□□□ 0.09
TLR4O00206 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TLR4O00206 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.62■□□□□ 0.09
TLR4O00206 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.62■□□□□ 0.09
TLR4O00206 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 ME2P1-201ENST00000426028 1970 ntBASIC15.62■□□□□ 0.09
TLR4O00206 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TLR4O00206 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.62■□□□□ 0.09
TLR4O00206 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.62■□□□□ 0.09
TLR4O00206 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
TLR4O00206 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TLR4O00206 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TLR4O00206 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.61■□□□□ 0.09
TLR4O00206 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.61■□□□□ 0.09
TLR4O00206 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.61■□□□□ 0.09
TLR4O00206 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TLR4O00206 ALOX12P2-203ENST00000570921 1945 ntBASIC15.61■□□□□ 0.09
TLR4O00206 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TLR4O00206 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
TLR4O00206 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.61■□□□□ 0.09
TLR4O00206 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.61■□□□□ 0.09
TLR4O00206 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.61■□□□□ 0.09
TLR4O00206 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.61■□□□□ 0.09
TLR4O00206 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.61■□□□□ 0.09
TLR4O00206 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TLR4O00206 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.61■□□□□ 0.09
TLR4O00206 ENPP7P5-201ENST00000541031 1031 ntBASIC15.61■□□□□ 0.09
TLR4O00206 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.61■□□□□ 0.09
TLR4O00206 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TLR4O00206 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.61■□□□□ 0.09
TLR4O00206 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.61■□□□□ 0.09
TLR4O00206 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TLR4O00206 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TLR4O00206 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
TLR4O00206 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TLR4O00206 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TLR4O00206 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TLR4O00206 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TLR4O00206 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.6■□□□□ 0.09
TLR4O00206 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TLR4O00206 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TLR4O00206 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TLR4O00206 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms