Protein–RNA interactions for Protein: O00189

AP4M1, AP-4 complex subunit mu-1, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1O00189 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 AC092474.2-201ENST00000424288 719 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.13□□□□□ -0.31
AP4M1O00189 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 AP006288.1-201ENST00000446065 395 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 HLA-J-202ENST00000469281 1241 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 SNHG9-202ENST00000564014 471 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.13□□□□□ -0.31
AP4M1O00189 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 AC134684.3-201ENST00000641758 218 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 PCDHA3-202ENST00000532566 4594 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 AP005117.1-202ENST00000581724 1908 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 AC010327.5-201ENST00000586923 3061 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.13□□□□□ -0.31
AP4M1O00189 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
AP4M1O00189 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
AP4M1O00189 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP4M1O00189 AC006486.2-201ENST00000624246 2199 ntBASIC13.13□□□□□ -0.31
AP4M1O00189 REXO1L2P-201ENST00000425429 2069 ntBASIC13.12□□□□□ -0.31
AP4M1O00189 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.12□□□□□ -0.31
AP4M1O00189 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.12□□□□□ -0.31
AP4M1O00189 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 AL645728.1-201ENST00000366221 2101 ntBASIC13.12□□□□□ -0.31
AP4M1O00189 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 ALOX12P2-203ENST00000570921 1945 ntBASIC13.12□□□□□ -0.31
AP4M1O00189 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
AP4M1O00189 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.12□□□□□ -0.31
AP4M1O00189 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP4M1O00189 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
AP4M1O00189 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.12□□□□□ -0.31
AP4M1O00189 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.12□□□□□ -0.31
AP4M1O00189 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
AP4M1O00189 AC254562.1-201ENST00000417586 456 ntBASIC13.12□□□□□ -0.31
AP4M1O00189 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.12□□□□□ -0.31
AP4M1O00189 SPDYE11-202ENST00000450699 704 ntBASIC13.12□□□□□ -0.31
AP4M1O00189 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.12□□□□□ -0.31
AP4M1O00189 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.12□□□□□ -0.31
AP4M1O00189 AP000344.2-201ENST00000512987 629 ntBASIC13.12□□□□□ -0.31
AP4M1O00189 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.12□□□□□ -0.31
AP4M1O00189 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.12□□□□□ -0.31
AP4M1O00189 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
AP4M1O00189 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.12□□□□□ -0.31
AP4M1O00189 SPDYE9P-201ENST00000570642 692 ntBASIC13.12□□□□□ -0.31
AP4M1O00189 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.12□□□□□ -0.31
AP4M1O00189 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.12□□□□□ -0.31
AP4M1O00189 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
AP4M1O00189 AC099522.2-201ENST00000607001 744 ntBASIC13.12□□□□□ -0.31
AP4M1O00189 AC026120.1-201ENST00000611536 926 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms