Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 MIR1224-201ENST00000408193 85 ntBASIC13.76□□□□□ -0.21
HMX3A6NHT5 KLF4P1-201ENST00000412782 1185 ntBASIC13.76□□□□□ -0.21
HMX3A6NHT5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 AC099336.1-202ENST00000602961 463 ntBASIC13.76□□□□□ -0.21
HMX3A6NHT5 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 AC091076.1-201ENST00000610741 619 ntBASIC13.76□□□□□ -0.21
HMX3A6NHT5 NPAP1P7-201ENST00000613027 823 ntBASIC13.76□□□□□ -0.21
HMX3A6NHT5 AC073592.5-201ENST00000624854 528 ntBASIC13.76□□□□□ -0.21
HMX3A6NHT5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HMX3A6NHT5 INTS4P1-201ENST00000438455 1935 ntBASIC13.76□□□□□ -0.21
HMX3A6NHT5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.76□□□□□ -0.21
HMX3A6NHT5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 AC092329.2-201ENST00000598402 547 ntBASIC13.75□□□□□ -0.21
HMX3A6NHT5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HMX3A6NHT5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.75□□□□□ -0.21
HMX3A6NHT5 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms