Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 SERBP1P3-201ENST00000459980 809 ntBASIC16.07■□□□□ 0.16
CAPN8A6NHC0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 AC027369.6-201ENST00000525520 931 ntBASIC16.07■□□□□ 0.16
CAPN8A6NHC0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 LINC02560-201ENST00000596379 459 ntBASIC16.07■□□□□ 0.16
CAPN8A6NHC0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.07■□□□□ 0.16
CAPN8A6NHC0 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 AC100757.3-201ENST00000622361 1406 ntBASIC16.06■□□□□ 0.16
CAPN8A6NHC0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 ATP5G2P4-201ENST00000442175 420 ntBASIC16.06■□□□□ 0.16
CAPN8A6NHC0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 AL390754.1-201ENST00000619088 582 ntBASIC16.06■□□□□ 0.16
CAPN8A6NHC0 MIR6799-201ENST00000620297 69 ntBASIC16.06■□□□□ 0.16
CAPN8A6NHC0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CAPN8A6NHC0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AL512638.1-201ENST00000457493 794 ntBASIC16.05■□□□□ 0.16
CAPN8A6NHC0 MEIS3P1-201ENST00000495167 958 ntBASIC16.05■□□□□ 0.16
CAPN8A6NHC0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 AC112504.1-201ENST00000623415 1841 ntBASIC16.05■□□□□ 0.16
CAPN8A6NHC0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CAPN8A6NHC0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms