Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC66A2RUB6 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC66A2RUB6 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC17.21■□□□□ 0.34
CCDC66A2RUB6 SSR4P1-203ENST00000599569 2260 ntBASIC17.21■□□□□ 0.34
CCDC66A2RUB6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.21■□□□□ 0.34
CCDC66A2RUB6 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CCDC66A2RUB6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 HMGA1P7-201ENST00000406908 502 ntBASIC17.2■□□□□ 0.34
CCDC66A2RUB6 KRT18P67-201ENST00000432816 1264 ntBASIC17.2■□□□□ 0.34
CCDC66A2RUB6 PRSS29P-201ENST00000440800 595 ntBASIC17.2■□□□□ 0.34
CCDC66A2RUB6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 AL645728.2-201ENST00000641974 660 ntBASIC17.2■□□□□ 0.34
CCDC66A2RUB6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC66A2RUB6 BEND3P1-201ENST00000421591 1944 ntBASIC17.19■□□□□ 0.34
CCDC66A2RUB6 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 AC004870.1-201ENST00000315132 882 ntBASIC17.19■□□□□ 0.34
CCDC66A2RUB6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 AL390755.1-201ENST00000623716 2027 ntBASIC17.19■□□□□ 0.34
CCDC66A2RUB6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CCDC66A2RUB6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
CCDC66A2RUB6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms