Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 FAM220BP-201ENST00000377689 816 ntBASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 AL355306.1-201ENST00000415580 579 ntBASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 AL645939.2-201ENST00000427340 991 ntBASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 RN7SL589P-201ENST00000481268 310 ntBASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 CCDC74BP1-201ENST00000508880 1123 ntBASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 AC092865.6-201ENST00000642101 219 ntBASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00959A0A1B0GUT2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AL136982.4-201ENST00000437689 1740 ntBASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 KRT8P37-201ENST00000451609 1420 ntBASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AC142381.1-201ENST00000426099 345 ntBASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AL139010.1-201ENST00000454878 894 ntBASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 PHKG1P2-201ENST00000457537 863 ntBASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AC026979.3-201ENST00000607315 403 ntBASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AC091812.2-201ENST00000619081 385 ntBASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 POR-201ENST00000394893 2532 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00959A0A1B0GUT2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms