Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC196A0A1B0GTZ2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC196A0A1B0GTZ2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC015922.1-201ENST00000421102 1152 ntBASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC114501.2-201ENST00000439631 535 ntBASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC005498.2-205ENST00000593218 784 ntBASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC022144.1-201ENST00000602255 1580 ntBASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC196A0A1B0GTZ2 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 TIMM17BP1-201ENST00000545713 516 ntBASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC009407.1-201ENST00000568958 598 ntBASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC027796.2-201ENST00000575326 344 ntBASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC196A0A1B0GTZ2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms