Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RHBDD3Q9Y3P4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RHBDD3Q9Y3P4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 AC142381.1-201ENST00000426099 345 ntBASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 MKNK2P1-201ENST00000437526 628 ntBASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 IGHV3-62-201ENST00000520057 340 ntBASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 LINC01225-203ENST00000563550 1244 ntBASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 AC112693.3-201ENST00000624819 1983 ntBASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RHBDD3Q9Y3P4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RHBDD3Q9Y3P4 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms