Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UBE2D4Q9Y2X8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 CRYGEP-201ENST00000412192 528 ntBASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC092910.1-201ENST00000482027 1129 ntBASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC096734.2-201ENST00000562054 433 ntBASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC024267.1-201ENST00000582320 895 ntBASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC010507.1-201ENST00000633895 436 ntBASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC007064.4-201ENST00000637740 555 ntBASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UBE2D4Q9Y2X8 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms