Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 PCED1CP-201ENST00000419887 785 ntBASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 RPS15P9-201ENST00000494093 319 ntBASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 MIR3909-201ENST00000579518 119 ntBASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 AC069148.1-201ENST00000608741 768 ntBASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KCNIP3Q9Y2W7 AC232323.1-201ENST00000540724 2099 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 REXO1L5P-201ENST00000622260 2098 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AL359183.1-201ENST00000623796 2132 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AC093724.1-201ENST00000448659 1027 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AP002469.2-201ENST00000531724 424 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 MIR3180-1-201ENST00000580374 94 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 MIR3180-3-201ENST00000584616 94 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 AC138894.3-201ENST00000603787 634 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KCNIP3Q9Y2W7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
KCNIP3Q9Y2W7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms