Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 PPT1-213ENST00000641319 2388 ntBASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 LINC00265-3P-201ENST00000447588 903 ntBASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 PRELID1P1-202ENST00000567272 903 ntBASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
LRCH1Q9Y2L9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
LRCH1Q9Y2L9 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 AC023024.2-201ENST00000623561 1993 ntBASIC15.08■□□□□ 0
LRCH1Q9Y2L9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 TOB2P1-201ENST00000469761 992 ntBASIC15.08■□□□□ 0
LRCH1Q9Y2L9 AC012615.1-201ENST00000565797 1299 ntBASIC15.08■□□□□ 0
LRCH1Q9Y2L9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 Z69720.1-201ENST00000601483 472 ntBASIC15.08■□□□□ 0
LRCH1Q9Y2L9 TERC-201ENST00000602385 541 ntBASIC15.08■□□□□ 0
LRCH1Q9Y2L9 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 AC005622.1-201ENST00000636801 1703 ntBASIC15.08■□□□□ 0
LRCH1Q9Y2L9 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LRCH1Q9Y2L9 AL353732.1-201ENST00000569618 1459 ntBASIC15.08■□□□□ 0
LRCH1Q9Y2L9 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
LRCH1Q9Y2L9 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms