Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 AC004840.1-201ENST00000636359 365 ntBASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FNDC3AQ9Y2H6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FNDC3AQ9Y2H6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
FNDC3AQ9Y2H6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FNDC3AQ9Y2H6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FNDC3AQ9Y2H6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
FNDC3AQ9Y2H6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.21■□□□□ 0.18
FNDC3AQ9Y2H6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
FNDC3AQ9Y2H6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 AL365330.1-201ENST00000607459 531 ntBASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 AC138969.3-201ENST00000546612 1459 ntBASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 AC138932.2-201ENST00000548268 1459 ntBASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 AC126755.4-201ENST00000549796 1459 ntBASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.2■□□□□ 0.18
FNDC3AQ9Y2H6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 FAM220BP-201ENST00000377689 816 ntBASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 BANF1P1-201ENST00000553684 263 ntBASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 AC024267.1-201ENST00000582320 895 ntBASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 RN7SL828P-201ENST00000607615 303 ntBASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FNDC3AQ9Y2H6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms