Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 KRT223P-202ENST00000449164 1292 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC023310.3-201ENST00000557027 670 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC100756.1-201ENST00000562736 682 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC138749.3-201ENST00000567691 622 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC061975.2-201ENST00000581722 295 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AC116165.1-201ENST00000611806 668 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 AL033527.4-201ENST00000641026 673 ntBASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PDZRN3Q9UPQ7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 AC073347.1-201ENST00000421633 2643 ntBASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.33■□□□□ 0.84
PDZRN3Q9UPQ7 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 AC119751.2-201ENST00000504529 210 ntBASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDZRN3Q9UPQ7 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 AC013268.4-201ENST00000637413 2228 ntBASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDZRN3Q9UPQ7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PDZRN3Q9UPQ7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms