Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 RPL17P11-201ENST00000417593 544 ntBASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 AC018635.2-201ENST00000608625 364 ntBASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC29.66■■■□□ 2.34
SHROOM4Q9ULL8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 MAGEA5-201ENST00000446757 942 ntBASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 HSPB1P2-201ENST00000448722 546 ntBASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 IMP3P2-201ENST00000489760 475 ntBASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 NDUFV2P1-201ENST00000596415 907 ntBASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
SHROOM4Q9ULL8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 ACKR1-201ENST00000368121 1240 ntBASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 AL096828.3-201ENST00000615354 462 ntBASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SHROOM4Q9ULL8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.33
SHROOM4Q9ULL8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC29.64■■■□□ 2.33
SHROOM4Q9ULL8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
SHROOM4Q9ULL8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
SHROOM4Q9ULL8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
SHROOM4Q9ULL8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC29.64■■■□□ 2.33
SHROOM4Q9ULL8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 ACR-203ENST00000529621 708 ntTSL 5 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC29.63■■■□□ 2.33
SHROOM4Q9ULL8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 EHF-205ENST00000527935 557 ntTSL 2 BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 HNRNPA1P48-202ENST00000565308 961 ntBASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC29.62■■■□□ 2.33
SHROOM4Q9ULL8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms