Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.4□□□□□ -0.74
LINC00474Q9P2X8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 REXO1L8P-201ENST00000604378 1897 ntBASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.4□□□□□ -0.75
LINC00474Q9P2X8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AL035456.1-201ENST00000456064 1369 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 ALOX12P2-203ENST00000570921 1945 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AP001282.1-201ENST00000531301 1499 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 HAUS4P1-201ENST00000406739 1145 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AC142381.1-201ENST00000426099 345 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AC243562.2-201ENST00000561247 970 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 LINC01225-203ENST00000563550 1244 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AL691403.2-201ENST00000618460 490 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 AC009093.7-201ENST00000623853 1223 ntBASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LINC00474Q9P2X8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
LINC00474Q9P2X8 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms