Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TSPY26P-202ENST00000565928 3884 ntBASIC14.5□□□□□ -0.09
LRFN1Q9P244 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRFN1Q9P244 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.5□□□□□ -0.09
LRFN1Q9P244 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 AL596087.1-201ENST00000400979 1969 ntBASIC14.49□□□□□ -0.09
LRFN1Q9P244 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 CICP6-201ENST00000457191 2729 ntBASIC14.49□□□□□ -0.09
LRFN1Q9P244 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 TOMM22P5-201ENST00000416399 439 ntBASIC14.49□□□□□ -0.09
LRFN1Q9P244 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 GPR53P-205ENST00000457298 1084 ntBASIC14.49□□□□□ -0.09
LRFN1Q9P244 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 AL033527.5-201ENST00000641382 801 ntBASIC14.49□□□□□ -0.09
LRFN1Q9P244 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 MIR600HG-201ENST00000449175 5984 ntBASIC14.49□□□□□ -0.09
LRFN1Q9P244 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 AL162727.3-201ENST00000635661 2787 ntBASIC14.49□□□□□ -0.09
LRFN1Q9P244 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LRFN1Q9P244 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LRFN1Q9P244 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRFN1Q9P244 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 U91328.1-201ENST00000437528 223 ntBASIC14.48□□□□□ -0.09
LRFN1Q9P244 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 TTTY23B-201ENST00000442790 549 ntBASIC14.48□□□□□ -0.09
LRFN1Q9P244 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.48□□□□□ -0.09
LRFN1Q9P244 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms