Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
BLOC1S4Q9NUP1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 BASP1P1-201ENST00000430708 665 ntBASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 UGT1A2P-201ENST00000454886 866 ntBASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
BLOC1S4Q9NUP1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 CROCCP1-201ENST00000426910 5675 ntBASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 AL121723.1-201ENST00000445194 1519 ntBASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 AC135586.1-201ENST00000539323 574 ntBASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 SRD5A3P1-201ENST00000603021 949 ntBASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
BLOC1S4Q9NUP1 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms