Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SALL1Q9NSC2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 MSTO2P-201ENST00000314835 1709 ntBASIC18.85■□□□□ 0.61
SALL1Q9NSC2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SALL1Q9NSC2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 HLA-V-201ENST00000429037 534 ntBASIC18.84■□□□□ 0.61
SALL1Q9NSC2 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SALL1Q9NSC2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 AL355864.2-201ENST00000447420 863 ntBASIC18.83■□□□□ 0.61
SALL1Q9NSC2 BCRP2-202ENST00000447763 634 ntBASIC18.83■□□□□ 0.61
SALL1Q9NSC2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 BCRP6-201ENST00000510112 632 ntBASIC18.83■□□□□ 0.61
SALL1Q9NSC2 BCRP7-201ENST00000511549 544 ntBASIC18.83■□□□□ 0.61
SALL1Q9NSC2 AP000812.2-201ENST00000538934 718 ntBASIC18.83■□□□□ 0.61
SALL1Q9NSC2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SALL1Q9NSC2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms