Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AC148477.4-201ENST00000613430 1793 ntBASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
CDC42SE2Q9NRR3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 RPS8P6-201ENST00000426177 609 ntBASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 AC112191.1-201ENST00000523689 701 ntBASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 RARRES2P8-201ENST00000566335 367 ntBASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 AC018845.2-201ENST00000568326 409 ntBASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 AC064836.3-201ENST00000607928 673 ntBASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
CDC42SE2Q9NRR3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 PHKG1P2-201ENST00000457537 863 ntBASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 CCDC74BP1-201ENST00000508880 1123 ntBASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 RNA5SP419-201ENST00000515908 135 ntBASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC10.9□□□□□ -0.66
CDC42SE2Q9NRR3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms